GRRM

General Info

GRRM - General Info - Main fields
Field Source Sample value
Title Set on Browse calculation publication Sample calculation
Browse Item URL pointing Browse published item https://iochem-bd.iciq.es/browse/handle/100/5672
Program program.header template GRRM 23
Author Username fullname Doe, John
Calculation type Custom value SC-AFIR2
Method Fixed value (method used) DFT (B3LYP)
Symmetry <scalar dictRef=”cc:pointgroup”> C2v
Temperature <scalar dictRef=”cc:temp”> 298.15K
Pressure <scalar dictRef=”cc:press”> 1.00 atm
../_images/GRRM_header.png ../_images/GRRM_header2.png

Atomic coordinates

The HTML resume will output a xyz coordinates table with current molecule atoms.

For every atom, we will output it’s serial number, atom type, coordinates in angstroms.

Atomic coordinates - Possible candidates
Section Note
<module cmlx:templateRef=”irc”> Intrinsic Reaction Coordinate module
<module cmlx:templateRef=”structure”> Initial structure
<module cmlx:templateRef=”final-geometry”> Optimized structure
<module cmlx:templateRef=”opt”> Opimization module
<module cmlx:templateRef=”frequencies”> Frequency module
../_images/GRRM_geometry.png

Molecular Info

This section captures molecule additional information not captured on previous section.

Molecular Info - Main fields
Field Source Sample value
Multiplicity <scalar dictRef=”cc:multiplicity”> 1
Charge <scalar dictRef=”cc:charge”> 0
../_images/GRRM_molecularinfo.png

Modules

Electronic Energy

Data sources:

  • <module cmlx:templateRef=”final-geometry”><scalar dictRef=”cc:energy”>
  • <module cmlx:templateRef=”opt”><scalar dictRef=”cc:energy”>
  • <module cmlx:templateRef=”structure”><scalar dictRef=”cc:energy”>
../_images/GRRM_module_energy.png

S**2

Data sources:

  • <module cmlx:templateRef=”final-geometry”><scalar dictRef=”cc:s2”>
  • <module cmlx:templateRef=”opt”><scalar dictRef=”cc:s2”>
  • <module cmlx:templateRef=”structure”><scalar dictRef=”cc:s2”>
../_images/GRRM_module_s2.png

Frequencies

Data sources: <module cmlx:templateRef=”frequencies”>

../_images/GRRM_module_frequencies.png

Thermochemistry

Data sources: <module cmlx:templateRef=”frequencies”>

../_images/GRRM_module_thermochemistry.png

Intrinsic Reaction Coordinate

Data sources: <module cmlx:templateRef=”irc”>

../_images/GRRM_module_irc.png