atomic.number

Implementation level
Type Status
CML extraction template image1
HTML5 representation image2
Template attributes
Attribute Value
source Amber topology atomic number section
id atomic.number
name Amber topology atomic number section
pattern \s*%FLAG\sATOMIC_NUMBER.*
endPattern .*[0-9]\s*$%.*
endPattern2 ~
endOffset 1
xml:base sections/atomic.number.xml
Input
%FLAG ATOMIC_NUMBER
%FORMAT(10I8)
      30       8       8       8       8       8       8       7       7       7
       7       6       6       6       6       6       6       6       6       6
       6       6       6       6       6       6       6       6       6       6
       6       6       6       6       6       6       6       6       6       6
       6       6       6       6       6       6       6       1       1       1
       1       1       1       1       1       1       1       1       1       1
       1       1       1       1       1       1       1       1       1       1
       1       1       1       1       1       1       1       1       1       1
       1       1       1       8       1       1       8       1       1       8
       1       1       8       1       1       8       1       1       8       1
       1       8       1       1       8       1       1       8       1       1
       8       1       1       8       1       1       8       1       1       8
       1       8       1       1       8       1       1       8       1       1
       8       1       1       8       1       1       8       1       1       8
       1       1       8       1       1       8       1       1
%FLAG MASS
Output text
<comment class="example.output" id="atomic.number">
         <module cmlx:templateRef="atomic.number">
            <array dataType="xsd:integer" dictRef="cc:elementType" size="7628">30 8 8 8 8 8 8 7 7 7 7 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8 1 1 8 1 1 8 1 1 8 1 1 8 1 1 8 1 1 8 1 1</array>
         </module>
    </comment>
Template definition
<record repeat="2" />
<record repeat="*">{1_10I,cc:elementType}</record>
<transform process="joinArrays" xpath=".//cml:array" />
<transform process="pullup" xpath=".//cml:array" />
<transform process="delete" xpath=".//cml:list" />