header
Type |
Status |
---|---|
CML extraction template |
|
HTML5 representation |
Attribute |
Value |
---|---|
source |
Amber log |
id |
header |
name |
Amber header |
pattern |
\s*-{20,}.*$\s*Amber.*$\s*-{20,}.* |
endPattern |
\s*\|\s*Run\son.* |
endOffset |
1 |
xml:base |
header.xml |
Input
-------------------------------------------------------
Amber 18 PMEMD 2018
-------------------------------------------------------
| PMEMD implementation of SANDER, Release 18
| Run on 02/11/2021 at 12:01:11
Output text
1<comment class="example.output" id="header">
2 <module cmlx:templateRef="header">
3 <scalar dataType="xsd:string" dictRef="cc:program">Amber</scalar>
4 <scalar dataType="xsd:string" dictRef="cc:programVersion">18</scalar>
5 <scalar dataType="xsd:date" dictRef="cc:runDate">2021-11-16T11:14:57.000</scalar>
6 </module>
7 </comment>
Template definition
1<record />
2<record>\s*{A,cc:program}{A,cc:programVersion}.*</record>
3<templateList> <template id="rundate" pattern="\s*\|\s*Run\son.*" enPattern=".*" endPattern2="~"> <record>\s*\|\s*Run\son{X,cc:runDate}</record>
4 </template>
5 </templateList>
6<transform process="createDate" xpath=".//cml:scalar[@dictRef='cc:runDate']" format="MM/dd/yyyy 'at' HH:mm:ss" />
7<transform process="pullup" xpath=".//cml:scalar" repeat="2" />
8<transform process="delete" xpath=".//cml:list[count(*)=0]" />
9<transform process="delete" xpath=".//cml:list[count(*)=0]" />
10<transform process="delete" xpath=".//cml:molecule[count(*)=0]" />