energy

Implementation level

Type

Status

CML extraction template

image1

HTML5 representation

image2

Template attributes

Attribute

Value

source

Turbomole log

id

energy

name

Final energies section

pattern

\s*\*{10,}\s*$\s*\*\s*\*\s*$\s*\*\s+RHF\s+energy.*

endPattern

\s*\*{10,}\s*

endOffset

1

repeat

*

xml:base

energy.xml

Input

*********************************************************************
*                                                                   *
*  RHF  energy                             :   -227.9061850367      *
*  CCSD correlation energy                 :     -0.8835141933      *
*  E4 doubles and triples contribution     :     -0.0356016214      *
*  E5 singles and triples contribution     :      0.0019555922      *
*  total correlation energy                :     -0.9171602226      *
*                                                                   *
*  Final CCSD(T) energy                    :   -228.8233452593      *
*                                                                   *
*  D1 diagnostic (CCSD)                    :      0.0560            *
*                                                                   *
*********************************************************************

Input

*********************************************************************
*                                                                   *
*  RHF  energy                             :   -227.9061850367      *
*  MP2 correlation energy (doubles)        :     -0.8639282496      *
*                                                                   *
*  Final MP2 energy                        :   -228.7701132863      *
*                                                                   *
*   E(S)   =     -0.5531547215      E(T)   =     -0.3107735281      *
*   E(OS)  =     -0.6567458975      E(SS)  =     -0.2071823521      *
*                                                                   *
*  SCS-MP2 energy                          :   -228.7633408977      *
*  (computed with  C(OS) =   1.2000  and  C(SS) =   0.3333)         *
*                                                                   *
*  SOS-MP2 energy                          :   -228.7599547035      *
*  (computed with  C(OS) =   1.3000)                                *
*                                                                   *
*  Norm of MP1 T2 amplitudes               :      0.2766656730      *
*                                                                   *
*********************************************************************

Input

*********************************************************************
*                                                                   *
*  RHF  energy                             :   -227.9061850367      *
*  correlation energy                      :     -0.8835141933      *
*                                                                   *
*  Final CCSD energy                       :   -228.7896992300      *
*                                                                   *
*  D1 diagnostic                           :      0.0560            *
*                                                                   *
*********************************************************************

Output text

1<comment class="example.output" id="energy">
2         <module cmlx:templateRef="energy">
3           <scalar dataType="xsd:double" dictRef="t:rhfEnergy" units="nonsi:hartree">-227.9061850367</scalar>
4            <module dictRef="CCSD(T)">
5               <scalar dataType="xsd:double" dictRef="t:finalEnergy" units="nonsi:hartree">-228.8233452593</scalar>
6            </module>
7            <scalar dataType="xsd:double" dictRef="t:d1diagnostic">0.0560</scalar>
8         </module>
9    </comment>

Output text

1<comment class="example.output" id="energy2">
2         <module cmlx:templateRef="energy">
3            <scalar dataType="xsd:double" dictRef="t:rhfEnergy" units="nonsi:hartree">-227.9061850367</scalar>
4            <module dictRef="MP2">
5               <scalar dataType="xsd:double" dictRef="t:finalEnergy" units="nonsi:hartree">-228.7701132863</scalar>
6            </module>
7         </module>
8    </comment>

Output text

1<comment class="example.output" id="energy3">
2         <module cmlx:templateRef="energy">
3            <scalar dataType="xsd:double" dictRef="t:rhfEnergy" units="nonsi:hartree">-227.9061850367</scalar>
4            <module dictRef="CCSD">
5               <scalar dataType="xsd:double" dictRef="t:finalEnergy" units="nonsi:hartree">-228.7896992300</scalar>
6            </module>
7         </module>
8    </comment>

Template definition

 1<templateList>  <template name="rhfenergy" pattern="\s*\*\s+RHF\s+energy\s+:.*" endPattern=".*" endPattern2="~" endOffset="0">    <record>\s*\*\s+RHF\s+energy\s+:{F,t:rhfEnergy}\*</record>
 2        </template>  <template name="finalenergy" pattern="\s*\*\s+Final.*energy.*" endPattern=".*" endPattern2="~" endOffset="0">    <record>\s*\*\s+Final\s*{A,t:module}\s*energy\s+:{F,t:finalEnergy}.*</record>    <transform process="addAttribute" xpath="." name="dictRef" value="$string(.//cml:scalar[@dictRef='t:module']/text())" />    <transform process="pullup" xpath=".//cml:scalar[@dictRef='t:finalEnergy']" repeat="2" />    <transform process="delete" xpath=".//cml:list" />
 3        </template>  <template name="d1diagnostic" pattern="\s*\*\s+D1\sdiagnostic\s\(CCSD\)\s+:.*" endPattern=".*" endPattern2="~" endOffset="0">    <record>\s*\*\s+D1\sdiagnostic\s\(CCSD\)\s+:{F,t:d1diagnostic}\*</record>
 4        </template>
 5    </templateList>
 6<transform process="pullup" xpath=".//cml:list/cml:scalar" repeat="2" />
 7<transform process="delete" xpath=".//cml:list[count(*)=0]" />
 8<transform process="delete" xpath=".//cml:module[count(*)=0]" />
 9<transform process="addUnits" xpath=".//cml:scalar[@dictRef='t:finalEnergy']" value="nonsi:hartree" />
10<transform process="addUnits" xpath=".//cml:scalar[@dictRef='t:rhfEnergy']" value="nonsi:hartree" />